Bioinformatics Scientist - Software Engineer

Published date Posted on Indeed on Aug 24, 2022 (36 d ago)

Rancho Biosciences is seeking a bioinformatics scientist with experience in software development and complex genomic workflows. Work from home while supporting high impact pharmaceutical, academic and institutional science programs. A proven track record of collaborative and independent contributions to human genomic, transcriptomic and clinical data projects is strongly preferred. A broad working knowledge of modern software engineering practices (including CI/CD and software containerization) and best practice methods is critical. This position is a unique opportunity for an individual to make a real impact on human health alongside our team of curators, computational biologists and data scientists.


Requirements

  • Ms or PhD in Bioinformatics, Software Engineering, Data science, or related field
  • Experience creating and running complex (bioinformatics) workflows on a variety of platforms, with an emphasis on cloud environments (e.g. AWS, GPC, SevenBridges).
  • Experience with workflow software such as Nextflow and/or Cromwell/WDL (preferred), CWL, or Snakemake.
  • Experience in workflow and software containerization for deployment on cloud environments
  • Have successfully implemented projects through the full software life cycle (planning, implementation, testing, release, and maintenance)
  • Proficiency in scripting (R, Python, and Bash)
  • Amazing communication skills and attention to detail are a must
  • Drive to learn new analysis methodologies and tools
  • Independently driven and hard working


Desired Experience

  • Hands-on experience with NGS data and demonstrated expertise in a relevant topic is strongly desired.
  • Experience in the pharmaceutical industry in deadline-driven environments.
  • Experience working in a team of multidisciplinary scientists, coordinating work across various roles and time zones while developing analysis and engineering code products.
  • Experience with writing reports and presenting results to clients

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